| Lake Merced | CA | Lake/Reservoir/Pond | Not Supporting | 2 | 308 |
| Lake Meredith | TX | Reservoir | Not Supporting | 3 | 10,495 |
| Lake Meredith | TX | Reservoir | Not Supporting | 3 | 5,741 |
| Lake Meredith. | CO | Lake/Reservoir/Pond | Not Supporting | 1 | 5,531 |
| Lake Meridian | WA | Lake/Reservoir/Pond | Not Supporting | 9 | 150 |
| Lake Merritt | CA | Lake/Reservoir/Pond | Not Supporting | 2 | 148 |
| Lake Merritt | OR | Lake/Reservoir/Pond | Not Supporting | 1 | 27 |
| Lake Merrywater | FL | Lake, Freshwater | Fully Supporting | 0 | 20 |
| Lake Metigoshe | ND | Lake, Natural | Fully Supporting | 0 | 1,543 |
| Lake Mexia | TX | Reservoir | Fully Supporting | 0 | 461 |
| Lake Meyer | IA | Lake | Fully Supporting | 0 | 37 |
| Lake Miami | IA | Lake | Not Supporting | 2 | 140 |
| Lake Miccosukee | FL | Lake, Freshwater | Not Supporting | 2 | 5,007 |
| Lake Michelle | FL | Lake, Freshwater | Fully Supporting | 0 | 25 |
| Lake Michigamme | MI | Lake, Freshwater | Not Supporting | 1 | 4,273 |
| Lake Michigan | WI | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan Shoreline | IN | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan (Not Indexed) (Salmonid) (Osrw) | IN | Lake, Freshwater | Not Supporting | 2 | 154,176 |
| Lake Michigan - Blue Rail Marina Beach | WI | Great Lakes Beach | Not Supporting | 1 | Filed in miles |
| Lake Michigan - Parkway (Racine Beach) 52-004 | WI | Great Lakes Beach | Not Supporting | 1 | Filed in miles |
| Lake Michigan Bar Lake Outlet Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Bronson/Kruse Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Cherry Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Covert Township Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan First Street Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Fisherman's Island State Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Grand Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Harbor Springs Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Henes Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Mackinaw City Beach #1 Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Mackinaw City Beach #2 Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Memorial Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Nearshore | IL | Great Lakes Open Water | Not Supporting | 9 | 125,440 |
| Lake Michigan North Beach Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan North of Frankfort (Michigan Jurisdiction) | MI | Great Lakes Shoreline | Not Supporting | 6 | Filed in miles |
| Lake Michigan P. J. Hoffmaster State Park Campground Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Petoskey State Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Pier Cove Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Public Shoreline Beach - Thompson Beach | MI | Inland Lake Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Shoreline | IN | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan Shoreline (Osrw) | IN | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan Shoreline (Pws) | IN | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan Shoreline (Pws) | IN | Great Lakes Shoreline | Not Supporting | 2 | Filed in miles |
| Lake Michigan Shoreline (Pws) (Osrw) | IN | Great Lakes Shoreline | Not Supporting | 3 | Filed in miles |
| Lake Michigan South of Frankfort (Michigan Jurisdiction) | MI | Great Lakes Open Water | Not Supporting | 6 | 5,665,920 |
| Lake Michigan Sturgeon Bay Township Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Sundling Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Van Buren State Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Warren Dunes State Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |
| Lake Michigan Wilderness State Park Beach | MI | Great Lakes Shoreline | Not Supporting | 1 | Filed in miles |