| Cruser Brook / Roaring Brook | NJ | Lake | Not Supporting | 5 | 0.30 |
| Crystal Lake/Pond Brook | NJ | Lake | Not Supporting | 6 | 179 |
| Cuckels Brook | NJ | Lake | Not Supporting | 1 | 7.16 |
| Culvers Creek | NJ | Lake | Not Supporting | 4 | 816 |
| Davenport Branch (above Pinewald Road) | NJ | Lake | Not Supporting | 2 | 13 |
| Dead River (above Harrisons Brook) | NJ | Lake | Not Supporting | 2 | 13 |
| Dead River (below Harrisons Brook) | NJ | Lake | Not Supporting | 6 | 2.51 |
| Deal Lake | NJ | Lake | Not Supporting | 8 | 163 |
| Deep Run (Alloway) | NJ | Lake | Not Supporting | 1 | 55 |
| Deep Run (GEHR) | NJ | Lake | Not Supporting | 3 | 22 |
| Deepavaal Brook | NJ | Lake | Not Supporting | 4 | 0.94 |
| Delawanna Creek (incl UDRV) | NJ | Lake | Not Supporting | 6 | 38 |
| Den Brook | NJ | Lake | Not Supporting | 2 | 287 |
| Dennis Ck / Cedar Swamp (Rt 47 to Rt 550) | NJ | Lake | Not Supporting | 3 | 26 |
| Dennis Creek (Jakes Landing Rd to Rt 47) | NJ | Lake | Not Supporting | 2 | 105 |
| Devils Brook | NJ | Lake | Not Supporting | 5 | 4.80 |
| Dividing Creek (above Mill Creek) | NJ | Lake | Not Supporting | 3 | 100 |
| Dividing Creek (below Mill Creek) | NJ | Lake | Not Supporting | 3 | 1.36 |
| Doctors Creek (above 74d28m40s) | NJ | Lake | Not Supporting | 1 | 14 |
| Doctors Creek (Allentown to 74d28m40s) | NJ | Lake | Not Supporting | 4 | 60 |
| Doctors Creek (below Allentown) | NJ | Lake | Not Supporting | 3 | 0.29 |
| Dove Mill Branch (Toms River) | NJ | Lake | Not Supporting | 5 | 56 |
| Drakes Brook (above Eyland Ave) | NJ | Lake | Not Supporting | 5 | 22 |
| Drakes Brook (below Eyland Ave) | NJ | Lake | Not Supporting | 1 | 9.70 |
| Dry Brook | NJ | Lake | Not Supporting | 1 | 11 |
| Duck Creek and UDRV to Assunpink Ck | NJ | Lake | Not Supporting | 2 | 640 |
| Duck Pond Run | NJ | Lake | Not Supporting | 2 | 2.20 |
| Duhernal Lake / Iresick Brook | NJ | Lake | Not Supporting | 4 | 118 |
| Dunnfield Creek (incl UDRV) | NJ | Lake | Not Supporting | 2 | 38 |
| Dwars Kill | NJ | Lake | Not Supporting | 2 | 2.11 |
| East Creek | NJ | Lake | Not Supporting | 2 | 65 |
| Edwards Run | NJ | Lake | Not Supporting | 5 | 3.40 |
| English Ck / Flat Ck / Cranberry Ck | NJ | Lake | Not Supporting | 2 | 12 |
| Fishing Creek / Fishing Mill Stream | NJ | Lake | Not Supporting | 3 | 14 |
| Flat Brook (below Tillman Brook) | NJ | Lake | Not Supporting | 2 | 14 |
| Flat Brook (Tillman Brook to Confluence) | NJ | Lake | Not Supporting | 3 | 8.22 |
| Forked Brook / Parker Brook | NJ | Lake | Not Supporting | 2 | 49 |
| Forked River NB (below old RR grade) | NJ | Lake | Not Supporting | 1 | 134 |
| Four Mile Branch (GEHR) | NJ | Lake | Not Supporting | 2 | 8.11 |
| Four Mile Branch (Mill Creek) | NJ | Lake | Not Supporting | 1 | 44 |
| Franklin Pond Creek | NJ | Lake | Not Supporting | 3 | 327 |
| Friendship Creek (above Burrs Mill Bk) | NJ | Lake | Not Supporting | 2 | 32 |
| Friendship Creek (below/incl Burrs Mill Bk) | NJ | Lake | Not Supporting | 4 | 67 |
| Furnace Brook | NJ | Lake | Not Supporting | 6 | 56 |
| Game Creek (above Rt 48) | NJ | Lake | Not Supporting | 4 | 27 |
| Game Creek (below Rt 48) | NJ | Lake | Not Supporting | 4 | 65 |
| Gaunts Brook / Hartshorne Mill Stream | NJ | Lake | Not Supporting | 4 | 44 |
| GEHR (39d32m50s to Hospitality Branch) | NJ | Lake | Not Supporting | 2 | 1.16 |
| GEHR (above New Freedom Rd) | NJ | Lake | Not Supporting | 2 | 34 |
| GEHR (AC Expressway to New Freedom Rd) | NJ | Lake | Not Supporting | 4 | 7.19 |